BrainVISA volume formats

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Formats

gz compressed NIFTI-1 image
NIFTI-1 image
GIS image
MINC image
gz compressed MINC image
SPM image
ECAT v image
ECAT i image
FreesurferMGZ
FreesurferMGH
Z compressed VIDA image
gz compressed VIDA image
Z compressed SPM image
gz compressed SPM image
Z compressed ECAT v image
gz compressed ECAT v image
Z compressed ECAT i image
gz compressed ECAT i image
JPEG image
GIF image
PNG image
BMP image
PBM image
PGM image
PPM image
XBM image
XPM image
TIFF image
TIFF(.tif) image
Directory
FDF image
VIDA image
gz compressed GIS image
Z compressed GIS image

Defined in file: brainvisa/types/builtin.py

Used in the following processes

Associated types

3D Functional volume
3D Volume
4D Functional volume
4D Volume
AC/PC DW Diffusion MR
AC/PC T2 Diffusion MR
anatomical Mask Template
anatomical Template
Anatomist BIC drawing
Ancillary Volume
Ancillary Volume DARTEL
Ancillary Volume DISCO
Ancillary Volume DISCO DARTEL
Ancillary Volume Inversed DARTEL
Ancillary Volume Inversed DARTEL and DISCO
Ancillary Volume Inversed DARTEL and DISCO Dest Native
Ancillary Volume Inversed DARTEL Dest Native
Ancillary Volume Inversed DISCO
Ancillary Volume Inversed DISCO Dest Native
Apparent Diffusion Coefficient
Atlas
Atlas DARTEL
Atlas DARTEL MNI
Atlas DARTEL Native
Atlas DISCO
Atlas DISCO DARTEL
Atlas DISCO DARTEL MNI
Atlas DISCO DARTEL Native
Atlas Inversed DARTEL
Atlas Inversed DARTEL and DISCO
Atlas Inversed DARTEL and DISCO Dest Native
Atlas Inversed DARTEL and DISCO Origin Native
Atlas Inversed DARTEL and DISCO Origin Native Dest Native
Atlas Inversed DARTEL Dest Native
Atlas Inversed DARTEL Origin Native
Atlas Inversed DARTEL Origin Native Dest Native
Atlas Inversed DISCO
Atlas Inversed DISCO DARTEL
Average cortical ribbon DISCO DARTEL
Average T1 MRI Bias Brain Alone DISCO DARTEL
Average T1 MRI Bias DISCO DARTEL
Baby Automatic Grey White Mask
Baby Grey White Mask
Baby Manual White Mask
Baby White Ridges
Biological glass slides
Biological image
Biological volume
Both CSF Mask
Both CSF+GREY Mask
Bottom Volume
Brain Mask
Brain Mask DISCO DARTEL
Bundles Volume
CAT shooting template
CAT template
Central Nuclei Template
Cerebellum ROI
CGN ROI
Cingular Pole Template
Cingular Pole Template Subject
Corpus Callosum mask
Corrected DW Diffusion MR
Correlation Quality Map
Cortex Catchment Bassins
Cortex Skeleton
CSF Probability Map
CSF+GREY Mask
CSFluid Probability Map
CT
Dartel Template
Deep Nuclei Mask
Difference Phase Map
Diffusion Anisotropy
Diffusion Density Map
Diffusion Orientation Map
Diffusion Scalar Map
Diffusion Standard Deviation
Diffusion Weighted T2
Divergence map
Divergence rate
Double echo complex image
DW Diffusion MR
Echo magnitude image
Extended AC/PC DW Diffusion MR
Extended AC/PC T2 Diffusion MR
FFD Displacement Field
FFD Field defData DARTEL
FFD Field defData DARTEL A Native TO B
FFD Field defData DARTEL A Native TO B Native
FFD Field defData DARTEL A TO B
FFD Field defData DARTEL A TO B Native
FFD Field defData DARTEL Native
FFD Field defData DISCO
FFD Field defData DISCO A Native TO B
FFD Field defData DISCO A Native TO B Native
FFD Field defData DISCO A TO B
FFD Field defData DISCO A TO B Native
FFD Field defData DISCO DARTEL
FFD Field defData DISCO DARTEL A Native TO B
FFD Field defData DISCO DARTEL A Native TO B Native
FFD Field defData DISCO DARTEL A TO B
FFD Field defData DISCO DARTEL A TO B Native
FFD Field defData DISCO DARTEL Native
FFD Field defData DISCO Native
FFD Field defData Inversed DARTEL
FFD Field defData Inversed DARTEL A Native TO B
FFD Field defData Inversed DARTEL A Native TO B Native
FFD Field defData Inversed DARTEL A TO B
FFD Field defData Inversed DARTEL A TO B Native
FFD Field defData Inversed DARTEL Native
FFD Field defData Inversed DISCO
FFD Field defData Inversed DISCO A Native TO B
FFD Field defData Inversed DISCO A Native TO B Native
FFD Field defData Inversed DISCO A TO B
FFD Field defData Inversed DISCO A TO B Native
FFD Field defData Inversed DISCO DARTEL
FFD Field defData Inversed DISCO DARTEL A Native TO B
FFD Field defData Inversed DISCO DARTEL A Native TO B Native
FFD Field defData Inversed DISCO DARTEL A TO B
FFD Field defData Inversed DISCO DARTEL A TO B Native
FFD Field defData Inversed DISCO DARTEL Native
FFD Field defData Inversed DISCO Native
FLAIR MRI
FLAIR MRI mid-point average
Flow Field DARTEL
Flow Field DISCO DARTEL
fMRI
fMRI activations
Fractional Anisotropy
Functional mask
Fus Det
Fus Det WM
GM Probability Map
Grey Mask Corrected
Grey Mask Corrected DARTEL
Grey Mask Corrected DARTEL MNI
Grey Mask Corrected DISCO
Grey Mask Corrected DISCO DARTEL
Grey Mask Corrected DISCO DARTEL MNI
Grey matter Probability Map
grey probability map
Grey White Mask
Grey White Mask Corrected DISCO
Grey White Mask Corrected DISCO DARTEL
Grey White Mask Corrected Inversed DARTEL and DISCO
Grey White Mask Corrected Inversed DARTEL and DISCO Dest Native
Grey White Mask Corrected Inversed DARTEL and DISCO Origin Native
Grey White Mask Corrected Inversed DARTEL and DISCO Origin Native Dest Native
Grey White Mid-Interface Volume
Gyri White Volume
HDW DARTEL flow field
Head Mask
Hemispheres Template
Hull Junction Volume
Intracranial labels
Intracranial mask
Jacobian determinant
Jacobian rate
Label volume
Left Cingular Pole Template
Left Cingular Pole Template Subject
Left coarse parcellation volume
Left Cortex Catchment Bassins
Left Cortex Skeleton
Left CSF Mask
Left CSF+GREY Mask
Left Grey White Mask
Left Gyri Volume
Left model parcellation volume
Left parcellation volume
Left Sulci Mask
Lesion distance map
Lesion Mask
Maximum Eigenvector
Morphologist Grey White Mask
MRI Ext Edge Image
MRI Ini
Nobias Inversed DARTEL and DISCO
Nobias Inversed DARTEL and DISCO Dest Native
Nobias Inversed DARTEL and DISCO Origin Native
Nobias Inversed DARTEL and DISCO Origin Native Dest Native
Nobias Normalized Inversed DARTEL and DISCO
Nobias Normalized Inversed DARTEL and DISCO Dest Native
Nobias Normalized Inversed DARTEL and DISCO Origin Native
Nobias Normalized Inversed DARTEL and DISCO Origin Native Dest Native
Non oriented DW Diffusion MR
P:Atlas Clique Matrix
P:Atlas Labels
P:Atlas Lateralization
P:Atlas Prior
P:Atlas Raw Labels
P:Atlas Raw Lateralization
P:Atlas Raw Prior
P:Atlas Raw Skull Stripping Mask
P:Atlas Raw Template
P:Atlas Registered Labels
P:Atlas Registered Lateralization
P:Atlas Registered Prior
P:Atlas Registered Skull Stripping Mask
P:Atlas Registered Template
P:Atlas Skull Stripping Mask
P:Atlas Template
P:Cleaned Parcellation
P:CSF Mask
P:EM Parcellation
P:EM Parcellation Proba
P:EM Prior Proba
P:Final Parcellation
P:Inverted MRI Bias Corrected
P:Inverted MRI Mean Curvature
P:Inverted T1 MRI Bias Corrected
P:Inverted T1 MRI Mean Curvature
P:Inverted T2 MRI Bias Corrected
P:Inverted T2 MRI Mean Curvature
P:Morpho Skull Stripping Mask
P:MRI
P:MRI Bias Corrected
P:MRI Bias Field
P:MRI Edges
P:MRI EM Bias Corrected
P:MRI EM Bias Field
P:MRI Filtered For Histo
P:MRI Mean Curvature
P:MRI N3 Bias Corrected
P:MRI N4 Bias Corrected
P:MRI N4 Bias Field
P:MRI Raw
P:MRI Raw Brain Masked
P:MRI Variance
P:MRI VIP Bias Corrected
P:MRI VIP Bias Field
P:MRI White Matter Ridges
P:Parcellation
P:Parcellation Proba
P:Pre Parcellation
P:Prior Proba
P:Reference Parcellation
P:Reference Parcellation Mask
P:Registration Target
P:Skull Stripping Mask
P:T1 MRI
P:T1 MRI Bias Corrected
P:T1 MRI Mean Curvature
P:T1 MRI Raw
P:T1 MRI Raw Brain Masked
P:T1 MRI Registration Target
P:T2 MRI
P:T2 MRI Bias Corrected
P:T2 MRI Mean Curvature
P:T2 MRI Raw
P:T2 MRI Raw Brain Masked
P:T2 MRI Registration Target
Parallel Diffusion Coefficient
Parcellation volume
PET
PET Template
Probabilities Volume
Probability Map
Projection convolution kernels
Rainbow 3D volume
Raw DW Diffusion MR
Raw FLAIR MRI
Raw Spectroscopy Data
Raw T1 MRI
Raw T1 MRI Brain Masked
Raw T2 Diffusion MR
Registered Raw T1 MRI with fMRI
Resamp Spline Image
RGB Eigenvector
Right Cingular Pole Template
Right Cingular Pole Template Subject
Right coarse parcellation volume
Right Cortex Catchment Bassins
Right Cortex Skeleton
Right CSF Mask
Right CSF+GREY Mask
Right Grey White Mask
Right Gyri Volume
Right model parcellation volume
Right parcellation volume
Right Sulci Mask
Simple Surface Volume
Simulated MRI
Spectroscopy Data
Split Brain Mask
SPM deformation field
SPM field
SPM filtered image
SPM labelled filtered image
SPM single subject
SPM TPM HDW DARTEL template
SPM TPM template
SPMt map
Subcortical labels
Sulcal Imprint Def Full Bottom
Sulcal Imprint Def Full Bottom DARTEL
Sulcal Imprint Def Full Bottom DARTEL MNI
Sulcal Imprint Def Full Hull Junction
Sulcal Imprint Def Full Hull Junction DARTEL
Sulcal Imprint Def Full Hull Junction DARTEL MNI
Sulcal Imprint Full Bottom
Sulcal Imprint Full Bottom DARTEL
Sulcal Imprint Full Bottom DARTEL MNI
Sulcal Imprint Full Bottom DARTEL Talairach
Sulcal Imprint Full Bottom DISCO
Sulcal Imprint Full Bottom DISCO DARTEL Talairach
Sulcal Imprint Full Bottom DISCO Talairach
Sulcal Imprint Full Bottom Talairach
Sulcal Imprint Full Hull Junction
Sulcal Imprint Full Hull Junction DARTEL
Sulcal Imprint Full Hull Junction DARTEL MNI
Sulcal Imprint Full Hull Junction DARTEL Talairach
Sulcal Imprint Full Hull Junction DISCO
Sulcal Imprint Full Hull Junction DISCO DARTEL Talairach
Sulcal Imprint Full Hull Junction DISCO Talairach
Sulcal Imprint Full Hull Junction Talairach
Sulci Volume
Sulci Voronoi
Sulci White Volume Patch
T1 Brain Mask
T1 Cortical Ribbon DISCO DARTEL
T1 MRI
T1 MRI 4D Bias Normalized DISCO DARTEL
T1 MRI AC/PC oriented
T1 MRI Bias Corrected
T1 MRI Bias Corrected DARTEL
T1 MRI Bias Corrected DARTEL MNI
T1 MRI Bias Corrected DARTEL Native
T1 MRI Bias Corrected DISCO
T1 MRI Bias Corrected DISCO DARTEL
T1 MRI Bias Corrected DISCO DARTEL MNI
T1 MRI Bias Corrected DISCO DARTEL Native
T1 MRI Bias Corrected Inversed DARTEL
T1 MRI Bias Corrected Inversed DARTEL Dest Native
T1 MRI Bias Corrected Inversed DARTEL Origin Native
T1 MRI Bias Corrected Inversed DARTEL Origin Native Dest Native
T1 MRI Bias Corrected Normalized
T1 MRI Bias Corrected Normalized DARTEL
T1 MRI Bias Corrected Normalized DARTEL Native
T1 MRI Bias Corrected Normalized DARTEL Template
T1 MRI Bias Corrected Normalized DISCO
T1 MRI Bias Corrected Normalized DISCO DARTEL
T1 MRI Bias Corrected Normalized DISCO DARTEL Native
T1 MRI Bias Corrected Normalized DISCO Talairach
T1 MRI Bias Corrected Normalized DISCO Template
T1 MRI Bias Corrected Normalized Inversed DARTEL
T1 MRI Bias Corrected Normalized Inversed DARTEL Dest Native
T1 MRI Bias Corrected Normalized Inversed DARTEL Origin Native
T1 MRI Bias Corrected Normalized Inversed DARTEL Origin Native Dest Native
T1 MRI Bias Corrected Normalized Masked DISCO DARTEL
T1 MRI Bias Corrected Normalized Talairach
T1 MRI Bias Corrected Normalized Template
T1 MRI Bias field
T1 MRI Denoised
T1 MRI Denoised and Bias Corrected
T1 MRI Edges
T1 MRI Filtered For Histo
T1 MRI intracranial labels
T1 MRI Mean Curvature
T1 MRI mid-point average
T1 MRI partial volume estimation
T1 MRI tissue probability map
T1 MRI tissue probability mask
T1 MRI Variance
T1 MRI White Matter Ridges
T2 Diffusion MR
T2 MRI
Template
Tissue probability map
Tissue Probability Map Template
Topo Brain
TPM HDW DARTEL created template
TPM HDW DARTEL template
TPM template
Transverse Diffusion Coefficient
Undistorted Shift Map
Velocity field
Ventricles Mask
Ventricule ROI
Volume Ratio
White Mask Corrected
White Mask Corrected DARTEL
White Mask Corrected DARTEL MNI
White Mask Corrected DISCO
White Mask Corrected DISCO DARTEL
White Mask Corrected DISCO DARTEL MNI
White matter Probability Map
WM Probability Map